diff options
Diffstat (limited to 'Library/Formula')
35 files changed, 0 insertions, 1352 deletions
diff --git a/Library/Formula/adol-c.rb b/Library/Formula/adol-c.rb deleted file mode 100644 index a936de05c..000000000 --- a/Library/Formula/adol-c.rb +++ /dev/null @@ -1,33 +0,0 @@ -require 'formula' - -class AdolC < Formula - homepage 'https://projects.coin-or.org/ADOL-C' - url 'http://www.coin-or.org/download/source/ADOL-C/ADOL-C-2.3.0.tgz' - sha1 'd9124ce0b199cb8b841a9a9ec10d1fb31ed11b49' - - head 'https://projects.coin-or.org/svn/ADOL-C/trunk/', :using => :svn - - depends_on 'colpack' - - def install - # Make our own realpath script - (buildpath/'realpath').write <<-EOS.undent - #!/usr/bin/python - import os,sys - print os.path.realpath(sys.argv[1]) - EOS - system "chmod +x ./realpath" - - # Configure may get automatically regenerated. So patch configure.ac also. - inreplace %w(configure configure.ac) do |s| - s.gsub! "readlink -f", "/#{buildpath}/realpath" - s.gsub! "lib64", "lib" - end - - system "./configure", "--prefix=#{prefix}", - "--enable-sparse", - "--with-colpack=#{HOMEBREW_PREFIX}" - system "make install" - system "make test" - end -end diff --git a/Library/Formula/ann.rb b/Library/Formula/ann.rb deleted file mode 100644 index 14e5d6f78..000000000 --- a/Library/Formula/ann.rb +++ /dev/null @@ -1,18 +0,0 @@ -require 'formula' - -class Ann < Formula - homepage 'http://www.cs.umd.edu/~mount/ANN/' - url 'http://www.cs.umd.edu/~mount/ANN/Files/1.1.2/ann_1.1.2.zip' - sha1 '622be90314a603ef9b2abadcf62379f73f28f46c' - - def install - system "make", "macosx-g++" - prefix.install "bin", "lib", "sample", "doc", "include" - end - - def test - cd "#{prefix}/sample" do - system "#{bin}/ann_sample", "-df", "data.pts", "-qf", "query.pts" - end - end -end diff --git a/Library/Formula/armadillo.rb b/Library/Formula/armadillo.rb deleted file mode 100644 index 18dbc70ec..000000000 --- a/Library/Formula/armadillo.rb +++ /dev/null @@ -1,15 +0,0 @@ -require 'formula' - -class Armadillo < Formula - homepage 'http://arma.sourceforge.net/' - url 'http://sourceforge.net/projects/arma/files/armadillo-3.800.2.tar.gz' - sha1 '9e2b33574ff577b1870dc8fdfff7d4ec88648576' - - depends_on 'cmake' => :build - depends_on 'boost' - - def install - system "cmake", ".", *std_cmake_args - system "make install" - end -end diff --git a/Library/Formula/bact.rb b/Library/Formula/bact.rb deleted file mode 100644 index 631df641a..000000000 --- a/Library/Formula/bact.rb +++ /dev/null @@ -1,13 +0,0 @@ -require 'formula' - -class Bact < Formula - homepage 'http://chasen.org/~taku/software/bact/' - url 'http://chasen.org/~taku/software/bact/bact-0.13.tar.gz' - sha1 'cdc8815e9258868699d98449598058011e993218' - - def install - system "make" - system "make test" - bin.install "bact_learn", "bact_classify","bact_mkmodel" - end -end diff --git a/Library/Formula/bali-phy.rb b/Library/Formula/bali-phy.rb deleted file mode 100644 index 20060314d..000000000 --- a/Library/Formula/bali-phy.rb +++ /dev/null @@ -1,26 +0,0 @@ -require 'formula' - -class BaliPhy < Formula - homepage 'http://www.biomath.ucla.edu/msuchard/bali-phy/' - url 'http://www.biomath.ucla.edu/msuchard/bali-phy/bali-phy-2.1.1.tar.gz' - sha1 'e72073a1c5b05c797668e476bfd8517594f074e6' - - depends_on 'gsl' - - fails_with :clang do - build 318 - cause <<-EOS.undent - io.H:25:31: error: use of undeclared identifier 'push_back' - void operator()(const T& t){push_back(t);} - EOS - end - - def install - mkdir 'macbuild' do - system "../configure", "--disable-debug", "--disable-dependency-tracking", - "--prefix=#{prefix}", - "--enable-cairo" - system "make install" - end - end -end diff --git a/Library/Formula/bedtools.rb b/Library/Formula/bedtools.rb deleted file mode 100644 index aa4184467..000000000 --- a/Library/Formula/bedtools.rb +++ /dev/null @@ -1,14 +0,0 @@ -require 'formula' - -class Bedtools < Formula - homepage 'http://code.google.com/p/bedtools/' - url 'http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz' - sha1 '1b1de3c35394a423f9ad98a9957a8853b426a578' - - head 'https://github.com/arq5x/bedtools.git' - - def install - system "make all" - prefix.install 'bin' - end -end diff --git a/Library/Formula/cminpack.rb b/Library/Formula/cminpack.rb deleted file mode 100644 index f652e33fd..000000000 --- a/Library/Formula/cminpack.rb +++ /dev/null @@ -1,14 +0,0 @@ -require 'formula' - -class Cminpack < Formula - homepage 'http://devernay.free.fr/hacks/cminpack/cminpack.html' - url 'http://devernay.free.fr/hacks/cminpack/cminpack-1.3.0.tar.gz' - sha1 '8bf19ce37b486707c402a046c33d823c9e359410' - - depends_on 'cmake' => :build - - def install - system "cmake", ".", *std_cmake_args - system "make install" - end -end diff --git a/Library/Formula/colpack.rb b/Library/Formula/colpack.rb deleted file mode 100644 index b21a2d1e5..000000000 --- a/Library/Formula/colpack.rb +++ /dev/null @@ -1,12 +0,0 @@ -require 'formula' - -class Colpack < Formula - homepage 'http://www.cscapes.org/coloringpage/software.htm' - url 'http://cscapes.cs.purdue.edu/download/ColPack/ColPack-1.0.9.tar.gz' - sha1 'c963424c3e97a7bc3756d3feb742418e89721e48' - - def install - system './configure', "--prefix=#{prefix}", '--disable-dependency-tracking' - system "make install" - end -end diff --git a/Library/Formula/flann.rb b/Library/Formula/flann.rb deleted file mode 100644 index dc0503109..000000000 --- a/Library/Formula/flann.rb +++ /dev/null @@ -1,39 +0,0 @@ -require 'formula' - -class Flann < Formula - homepage 'http://www.cs.ubc.ca/~mariusm/index.php/FLANN/FLANN' - url 'http://people.cs.ubc.ca/~mariusm/uploads/FLANN/flann-1.8.2-src.zip' - sha1 '62ace1c41365dfc8ceabde1381febc5c8b71ad98' - - option 'enable-python', 'Enable python bindings' - option 'enable-matlab', 'Enable matlab/octave bindings' - option 'with-examples', 'Build and install example binaries' - - depends_on 'cmake' => :build - depends_on 'hdf5' - - depends_on 'octave' if build.include? 'enable-matlab' - depends_on 'numpy' => :python if build.include? 'enable-python' - - def install - args = std_cmake_args - if build.include? 'enable-matlab' - args << '-DBUILD_MATLAB_BINDINGS:BOOL=ON' - else - args << '-DBUILD_MATLAB_BINDINGS:BOOL=OFF' - end - - if build.include? 'enable-python' - args << '-DBUILD_PYTHON_BINDINGS:BOOL=ON' - else - args << '-DBUILD_PYTHON_BINDINGS:BOOL=OFF' - end - - inreplace 'CMakeLists.txt', 'add_subdirectory( examples )', '' unless build.include? 'with-examples' - - mkdir 'build' do - system 'cmake', '..', *args - system 'make install' - end - end -end diff --git a/Library/Formula/glpk.rb b/Library/Formula/glpk.rb deleted file mode 100644 index c89a7b848..000000000 --- a/Library/Formula/glpk.rb +++ /dev/null @@ -1,14 +0,0 @@ -require 'formula' - -class Glpk < Formula - homepage 'http://www.gnu.org/software/glpk/' - url 'http://ftpmirror.gnu.org/glpk/glpk-4.48.tar.gz' - mirror 'http://ftp.gnu.org/gnu/glpk/glpk-4.48.tar.gz' - sha1 'e00c92faa38fd5d865fa27206abbb06680bab7bb' - - def install - system "./configure", "--disable-dependency-tracking", - "--prefix=#{prefix}" - system "make install" - end -end diff --git a/Library/Formula/igraph.rb b/Library/Formula/igraph.rb deleted file mode 100644 index f03b8d484..000000000 --- a/Library/Formula/igraph.rb +++ /dev/null @@ -1,21 +0,0 @@ -require 'formula' - -class Igraph < Formula - homepage 'http://igraph.sourceforge.net' - url 'http://downloads.sourceforge.net/sourceforge/igraph/igraph-0.6.5.tar.gz' - sha1 'f1605c5592e8bf3c97473f7781e77b6608448f78' - - option :universal - - # GMP is optional, and doesn't have a universal build - depends_on 'gmp' => :optional unless build.universal? - - def install - ENV.universal_binary if build.universal? - - system "./configure", "--disable-debug", - "--disable-dependency-tracking", - "--prefix=#{prefix}" - system "make install" - end -end diff --git a/Library/Formula/insighttoolkit.rb b/Library/Formula/insighttoolkit.rb deleted file mode 100644 index c83c0e12c..000000000 --- a/Library/Formula/insighttoolkit.rb +++ /dev/null @@ -1,29 +0,0 @@ -require 'formula' - -class Insighttoolkit < Formula - homepage 'http://www.itk.org' - url 'http://sourceforge.net/projects/itk/files/itk/4.3/InsightToolkit-4.3.1.tar.gz' - sha1 '85375a316dd39f7f70dee5a2bd022f768db28eeb' - - head 'git://itk.org/ITK.git' - - option 'examples', 'Compile and install various examples' - option 'with-opencv-bridge', 'Include OpenCV bridge' - - depends_on 'cmake' => :build - - def install - args = std_cmake_args + %W[ - -DBUILD_TESTING=OFF - -DBUILD_SHARED_LIBS=ON - ] - args << ".." - args << '-DBUILD_EXAMPLES=' + ((build.include? 'examples') ? 'ON' : 'OFF') - args << '-DModule_ITKVideoBridgeOpenCV=' + ((build.include? 'with-opencv-bridge') ? 'ON' : 'OFF') - - mkdir 'itk-build' do - system "cmake", *args - system "make install" - end - end -end diff --git a/Library/Formula/mafft.rb b/Library/Formula/mafft.rb deleted file mode 100644 index c16dd6e52..000000000 --- a/Library/Formula/mafft.rb +++ /dev/null @@ -1,35 +0,0 @@ -require 'formula' - -class Mafft < Formula - homepage 'http://mafft.cbrc.jp/alignment/software/index.html' - url 'http://align.bmr.kyushu-u.ac.jp/mafft/software/mafft-6.717-with-extensions-src.tgz' - sha1 '18d82340918949bbcdce659d4a09421ce06d67b1' - - fails_with :clang do - build 421 - cause <<-EOS.undent - Clang does not allow default arguments in out-of-line definitions of - class template members. - EOS - end - - def install - cd 'core' do - system "make", "CC=#{ENV.cc}", - "CFLAGS=#{ENV.cflags}", - "PREFIX=#{prefix}", - "MANDIR=#{man1}", - "install" - end - - cd 'extensions' do - system "make", "CC=#{ENV.cc}", - "CXX=#{ENV.cxx}", - "CXXFLAGS=#{ENV.cxxflags}", - "CFLAGS=#{ENV.cflags}", - "PREFIX=#{prefix}", - "MANDIR=#{man1}", - "install" - end - end -end diff --git a/Library/Formula/mallet.rb b/Library/Formula/mallet.rb deleted file mode 100644 index 43ef6d28d..000000000 --- a/Library/Formula/mallet.rb +++ /dev/null @@ -1,28 +0,0 @@ -require 'formula' - -class Mallet < Formula - homepage 'http://mallet.cs.umass.edu/' - url 'http://mallet.cs.umass.edu/dist/mallet-2.0.7.tar.gz' - sha1 '45f6ad87ad7605d9f009be5f47b0bbf2ca47d89e' - - # Creates a wrapper to set the classpath before executing - # the utility. - def startup_script(name) - <<-EOS.undent - #!/bin/sh - CLASSPATH=$CLASSPATH:#{libexec}/class:#{libexec}/lib/mallet-deps.jar "#{libexec}/bin/#{name}" "$@" - EOS - end - - def install - rm Dir['bin/*.{bat,dll,exe}'] # Remove all windows files - prefix.install_metafiles - libexec.install Dir['*'] - cd libexec+'bin' do - Dir['*'].each do |file| - fn = File.basename(file) - (bin+fn).write startup_script(fn) - end - end - end -end diff --git a/Library/Formula/mathgl.rb b/Library/Formula/mathgl.rb deleted file mode 100644 index e670d5a3c..000000000 --- a/Library/Formula/mathgl.rb +++ /dev/null @@ -1,56 +0,0 @@ -require 'formula' - -class Mathgl < Formula - homepage 'http://mathgl.sourceforge.net/' - url 'http://downloads.sourceforge.net/mathgl/mathgl-2.1.2.tar.gz' - sha1 'bd3e797f8616c1f8afd0955fc9b87a2605cbf5ff' - - option 'fltk', 'Build the fltk widget and mglview using X11' - option 'qt4', 'Build the Qt widget, the udav gui, and mglview using Qt4' - option 'wx', 'Build the wxWidget widget' - option 'gif', 'Build support for GIF' - option 'hdf5', 'Build support for hdf5' - - depends_on 'cmake' => :build - depends_on 'gsl' => :recommended - depends_on 'jpeg' => :recommended - depends_on 'libharu' => :recommended - depends_on :libpng => :recommended - depends_on 'hdf5' if build.include? 'hdf5' - depends_on 'fltk' if build.include? 'fltk' - depends_on 'qt' if build.include? 'qt4' - depends_on 'wxmac' if build.include? 'wx' - depends_on 'giflib' if build.include? 'gif' - depends_on :x11 if build.include? 'fltk' - - def install - args = std_cmake_args + %w[ - -Denable-glut=ON - -Denable-gsl=ON - -Denable-jpeg=ON - -Denable-pthread=ON - -Denable-pdf=ON - -Denable-python=OFF - -Denable-octave=OFF - ] - - args << '-Denable-qt=ON' if build.include? 'qt4' - args << '-Denable-gif=ON' if build.include? 'gif' - args << '-Denable-hdf5_18=ON' if build.include? 'hdf5' - args << '-Denable-fltk=ON' if build.include? 'fltk' - args << '-Denable-wx=ON' if build.include? 'wx' - args << '..' - rm 'ChangeLog' if File.exist? 'ChangeLog' # rm this problematic symlink. - mkdir 'brewery' do - system 'cmake', *args - system 'make install' - cd 'examples' do - bin.install Dir['mgl*_example'] - end - end - end - - test do - system "#{bin}/mgl_example" - end -end diff --git a/Library/Formula/mathomatic.rb b/Library/Formula/mathomatic.rb deleted file mode 100644 index db6a24103..000000000 --- a/Library/Formula/mathomatic.rb +++ /dev/null @@ -1,17 +0,0 @@ -require 'formula' - -class Mathomatic < Formula - homepage 'http://www.mathomatic.org/' - url 'http://mathomatic.org/mathomatic-16.0.5.tar.bz2' - sha1 'aaaf4df4aa3dc9ea748211278e657c2195858c24' - - def install - ENV['prefix'] = prefix - system "make READLINE=1" - system "make m4install" - cd 'primes' do - system 'make' - system 'make install' - end - end -end diff --git a/Library/Formula/maxima.rb b/Library/Formula/maxima.rb deleted file mode 100644 index d93adb6b8..000000000 --- a/Library/Formula/maxima.rb +++ /dev/null @@ -1,53 +0,0 @@ -require 'formula' - -class Maxima < Formula - homepage 'http://maxima.sourceforge.net/' - url 'http://sourceforge.net/projects/maxima/files/Maxima-source/5.28.0-source/maxima-5.28.0.tar.gz' - sha1 '52d7dad4681711a6ead73b72835b177107363b9c' - - depends_on 'gettext' - depends_on 'sbcl' - depends_on 'gnuplot' - depends_on 'rlwrap' - - # required for maxima help(), describe(), "?" and "??" lisp functionality - skip_clean 'share/info' - - def patches - # fixes 3468021: imaxima.el uses incorrect tmp directory on OS X: - # https://sourceforge.net/tracker/?func=detail&aid=3468021&group_id=4933&atid=104933 - DATA - end - - def install - ENV.deparallelize - system "./configure", "--disable-debug", "--disable-dependency-tracking", - "--prefix=#{prefix}", - "--enable-sbcl", - "--enable-gettext" - # Per build instructions - ENV['LANG'] = 'C' - system 'make' - system 'make check' - system 'make install' - end - - def test - system "#{bin}/maxima", "--batch-string='run_testsuite(); quit();'" - end -end - -__END__ -diff --git a/interfaces/emacs/imaxima/imaxima.el b/interfaces/emacs/imaxima/imaxima.el -index e3feaa6..3a52a0b 100644 ---- a/interfaces/emacs/imaxima/imaxima.el -+++ b/interfaces/emacs/imaxima/imaxima.el -@@ -296,6 +296,8 @@ nil means no scaling at all, t allows any scaling." - (temp-directory)) - ((eql system-type 'cygwin) - "/tmp/") -+ ((eql system-type 'darwin) -+ "/tmp/") - (t temporary-file-directory)) - "*Directory used for temporary TeX and image files." - :type '(directory) diff --git a/Library/Formula/mcl.rb b/Library/Formula/mcl.rb deleted file mode 100644 index 5c56284cd..000000000 --- a/Library/Formula/mcl.rb +++ /dev/null @@ -1,21 +0,0 @@ -require 'formula' - -class Mcl < Formula - homepage 'http://micans.org/mcl' - url 'http://micans.org/mcl/src/mcl-12-135.tar.gz' - version '12-135' - sha1 '27e7bc08fe5f0d3361bbc98d343c9d045712e406' - - def install - # Force the compiler to run in C89 mode because one of the source - # files uses "restrict" as a variable name and this is a restricted - # keyword in C99 - ENV.append_to_cflags '-std=c89' - - bin.mkpath - system "./configure", "--disable-dependency-tracking", - "--prefix=#{prefix}", - "--enable-blast" - system "make install" - end -end diff --git a/Library/Formula/metis.rb b/Library/Formula/metis.rb deleted file mode 100644 index 4943459b4..000000000 --- a/Library/Formula/metis.rb +++ /dev/null @@ -1,14 +0,0 @@ -require 'formula' - -class Metis < Formula - homepage 'http://glaros.dtc.umn.edu/gkhome/views/metis' - url 'http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.0.2.tar.gz' - sha1 'b5a278fa06c581e068a8296d158576a4b750f983' - - depends_on 'cmake' => :build - - def install - system "make", "config", "prefix=#{prefix}" - system "make install" - end -end diff --git a/Library/Formula/mpsolve.rb b/Library/Formula/mpsolve.rb deleted file mode 100644 index db51974ea..000000000 --- a/Library/Formula/mpsolve.rb +++ /dev/null @@ -1,15 +0,0 @@ -require 'formula' - -class Mpsolve < Formula - homepage 'http://www.dm.unipi.it/cluster-pages/mpsolve/index.htm' - url 'http://www.dm.unipi.it/cluster-pages/mpsolve/mpsolve.tgz' - sha1 '7b445f835325c62928deb99155b7ca9e646e6f97' - version '2.2' - - depends_on 'gmp' - - def install - system 'make' - bin.install 'unisolve' - end -end diff --git a/Library/Formula/nauty.rb b/Library/Formula/nauty.rb deleted file mode 100644 index d8f073efe..000000000 --- a/Library/Formula/nauty.rb +++ /dev/null @@ -1,29 +0,0 @@ -require 'formula' - -class Nauty < Formula - homepage 'http://cs.anu.edu.au/~bdm/nauty/' - url 'http://cs.anu.edu.au/~bdm/nauty/nauty24r2.tar.gz' - version '24r2' - sha1 '3f012beb399a9340f77d0104bf1c9bf1100e8286' - - option 'run-tests', "Runs the included test programs" - - def install - system "./configure", "--disable-debug", "--disable-dependency-tracking", - "--prefix=#{prefix}" - system "make all" - system "make checks" if build.include? 'run-tests' - - bin.install %w{ NRswitchg addedgeg amtog biplabg catg complg copyg countg - deledgeg directg dreadnaut dretog genbg geng genrang gentourng labelg - listg multig newedgeg pickg planarg shortg showg } - - prefix.install 'nug.pdf' - end - - def caveats; <<-EOS.undent - User guide was saved locally to: - #{prefix}/nug.pdf - EOS - end -end diff --git a/Library/Formula/octave.rb b/Library/Formula/octave.rb deleted file mode 100644 index 368bf6286..000000000 --- a/Library/Formula/octave.rb +++ /dev/null @@ -1,106 +0,0 @@ -require 'formula' - -# Leading underscore because this method is defined differently -# in compat, and anything that loads this file would end up with -# this definition instead! -def _snow_leopard_64? - # 64 bit builds on 10.6 require some special handling. - MacOS.version == :snow_leopard and MacOS.prefer_64_bit? -end - -class Octave < Formula - homepage 'http://www.gnu.org/software/octave/index.html' - url 'http://ftpmirror.gnu.org/octave/octave-3.6.4.tar.bz2' - mirror 'http://ftp.gnu.org/gnu/octave/octave-3.6.4.tar.bz2' - sha1 '3cc9366b6dbbd336eaf90fe70ad16e63705d82c4' - - option 'without-fltk', 'Compile without fltk (disables native graphics)' - option 'test', 'Run tests before installing' - - depends_on 'pkg-config' => :build - depends_on 'gnu-sed' => :build - depends_on 'texinfo' => :build # OS X's makeinfo won't work for this - - depends_on :x11 - depends_on 'fftw' - # When building 64-bit binaries on Snow Leopard, there are naming issues with - # the dot product functions in the BLAS library provided by Apple's - # Accelerate framework. See the following thread for the gory details: - # - # http://www.macresearch.org/lapackblas-fortran-106 - # - # We can work around the issues using dotwrp. - depends_on 'dotwrp' if _snow_leopard_64? - # octave refuses to work with BSD readline, so it's either this or --disable-readline - depends_on 'readline' - depends_on 'curl' if MacOS.version == :leopard # Leopard's libcurl is too old - - # additional features - depends_on 'suite-sparse' - depends_on 'glpk' - depends_on 'graphicsmagick' => :recommended - depends_on 'hdf5' - depends_on 'pcre' - depends_on 'qhull' - depends_on 'qrupdate' - - if build.include? 'without-fltk' - # required for plotting if we don't have native graphics - depends_on 'gnuplot' - else - depends_on 'fltk' - end - - def install - ENV.fortran - - # yes, compiling octave takes a long time, but using -O2 gives negligible savings - # build time with -O2: user 58m5.295s sys 7m29.064s - # build time with -O3: user 58m58.054s sys 7m52.221s - ENV.m64 if MacOS.prefer_64_bit? - ENV.append_to_cflags "-D_REENTRANT" - - args = [ - "--disable-dependency-tracking", - "--prefix=#{prefix}", - # Cant use `-framework Accelerate` because `mkoctfile`, the tool used to - # compile extension packages, can't parse `-framework` flags. - "--with-blas=#{'-ldotwrp ' if _snow_leopard_64?}-Wl,-framework -Wl,Accelerate", - # SuiteSparse-4.x.x fix, see http://savannah.gnu.org/bugs/?37031 - "--with-umfpack=-lumfpack -lsuitesparseconfig", - ] - args << "--without-framework-carbon" if MacOS.version >= :lion - # avoid spurious 'invalid assignment to cs-list' erorrs on 32 bit installs: - args << 'CXXFLAGS=-O0' unless MacOS.prefer_64_bit? - - system "./configure", *args - system "make all" - system "make check 2>&1 | tee make-check.log" if build.include? 'test' - system "make install" - - prefix.install ["test/fntests.log", "make-check.log"] if build.include? 'test' - end - - def caveats - native_caveats = <<-EOS.undent - Octave supports "native" plotting using OpenGL and FLTK. You can activate - it for all future figures using the Octave command - - graphics_toolkit ("fltk") - - or for a specific figure handle h using - - graphics_toolkit (h, "fltk") - - Otherwise, gnuplot is still used by default, if available. - EOS - - gnuplot_caveats = <<-EOS.undent - When plotting with gnuplot, you should set "GNUTERM=x11" before running octave; - if you are using Aquaterm, use "GNUTERM=aqua". - EOS - - s = gnuplot_caveats - s = native_caveats + s unless build.include? 'without-fltk' - end -end diff --git a/Library/Formula/opencv.rb b/Library/Formula/opencv.rb deleted file mode 100644 index 63b0a32c3..000000000 --- a/Library/Formula/opencv.rb +++ /dev/null @@ -1,126 +0,0 @@ -require 'formula' - -def which_python - "python" + `python -c 'import sys;print(sys.version[:3])'`.strip -end - -def site_package_dir - "lib/#{which_python}/site-packages" -end - -class Opencv < Formula - homepage 'http://opencv.org/' - url 'http://sourceforge.net/projects/opencvlibrary/files/opencv-unix/2.4.4/OpenCV-2.4.4a.tar.bz2' - sha1 '6e518c0274a8392c0c98d18ef0ef754b9c596aca' - - env :std # to find python - - option '32-bit' - option 'with-qt', 'Build the Qt4 backend to HighGUI' - option 'with-tbb', 'Enable parallel code in OpenCV using Intel TBB' - option 'with-opencl', 'Enable gpu code in OpenCV using OpenCL' - - depends_on 'cmake' => :build - depends_on 'pkg-config' => :build - depends_on 'numpy' => :python - - depends_on 'eigen' => :optional - depends_on 'libtiff' => :optional - depends_on 'jasper' => :optional - depends_on 'tbb' => :optional - depends_on 'qt' => :optional - depends_on :libpng - - # Can also depend on ffmpeg, but this pulls in a lot of extra stuff that - # you don't need unless you're doing video analysis, and some of it isn't - # in Homebrew anyway. Will depend on openexr if it's installed. - - # Fix non-ASCII characters breaking in Java 1.7 - # https://github.com/Itseez/opencv/pull/718 - def patches; DATA; end - - def install - args = std_cmake_args + %w[ - -DCMAKE_OSX_DEPLOYMENT_TARGET= - -DWITH_CUDA=OFF - -DBUILD_ZLIB=OFF - -DBUILD_TIFF=OFF - -DBUILD_PNG=OFF - -DBUILD_JPEG=OFF - -DBUILD_JASPER=OFF - -DBUILD_TESTS=OFF - -DBUILD_PERF_TESTS=OFF - ] - if build.build_32_bit? - args << "-DCMAKE_OSX_ARCHITECTURES=i386" - args << "-DOPENCV_EXTRA_C_FLAGS='-arch i386 -m32'" - args << "-DOPENCV_EXTRA_CXX_FLAGS='-arch i386 -m32'" - end - args << '-DWITH_QT=ON' if build.with? 'qt' - args << '-DWITH_TBB=ON' if build.with? 'tbb' - args << '-DWITH_OPENCL=ON' if build.with? 'opencl' - - # The CMake `FindPythonLibs` Module is dumber than a bag of hammers when - # more than one python installation is available---for example, it clings - # to the Header folder of the system Python Framework like a drowning - # sailor. - # - # This code was cribbed from the VTK formula and uses the output to - # `python-config` to do the job FindPythonLibs should be doing in the first - # place. - python_prefix = `python-config --prefix`.strip - # Python is actually a library. The libpythonX.Y.dylib points to this lib, too. - if File.exist? "#{python_prefix}/Python" - # Python was compiled with --framework: - args << "-DPYTHON_LIBRARY='#{python_prefix}/Python'" - if !MacOS::CLT.installed? and python_prefix.start_with? '/System/Library' - # For Xcode-only systems, the headers of system's python are inside of Xcode - args << "-DPYTHON_INCLUDE_DIR='#{MacOS.sdk_path}/System/Library/Frameworks/Python.framework/Versions/2.7/Headers'" - else - args << "-DPYTHON_INCLUDE_DIR='#{python_prefix}/Headers'" - end - else - python_lib = "#{python_prefix}/lib/lib#{which_python}" - if File.exists? "#{python_lib}.a" - args << "-DPYTHON_LIBRARY='#{python_lib}.a'" - else - args << "-DPYTHON_LIBRARY='#{python_lib}.dylib'" - end - args << "-DPYTHON_INCLUDE_DIR='#{python_prefix}/include/#{which_python}'" - end - args << "-DPYTHON_PACKAGES_PATH='#{lib}/#{which_python}/site-packages'" - - args << '..' - mkdir 'macbuild' do - system 'cmake', *args - system "make" - system "make install" - end - end - - def caveats; <<-EOS.undent - The OpenCV Python module will not work until you edit your PYTHONPATH like so: - export PYTHONPATH="#{HOMEBREW_PREFIX}/#{site_package_dir}:$PYTHONPATH" - - To make this permanent, put it in your shell's profile (e.g. ~/.profile). - EOS - end -end - -__END__ -diff --git a/modules/java/build.xml.in b/modules/java/build.xml.in -index 98ba2e3..c1c1854 100644 ---- a/modules/java/build.xml.in -+++ b/modules/java/build.xml.in -@@ -8,8 +8,9 @@ - <!-- http://stackoverflow.com/questions/3584968/ant-how-to-compile-jar-that-includes-source-attachment --> - <javac sourcepath="" srcdir="src" destdir="src" debug="on" includeantruntime="false" > - <include name="**/*.java"/> -+ <compilerarg line="-encoding utf-8"/> - </javac> - - <jar basedir="src" destfile="bin/@JAR_NAME@"/> - </target> --</project> -\ No newline at end of file -+</project> diff --git a/Library/Formula/openimageio.rb b/Library/Formula/openimageio.rb deleted file mode 100644 index 5c1b55aff..000000000 --- a/Library/Formula/openimageio.rb +++ /dev/null @@ -1,143 +0,0 @@ -require 'formula' - -class J2kp4files < Formula - url 'http://pkgs.fedoraproject.org/repo/pkgs/openjpeg/j2kp4files_v1_5.zip/27780ed3254e6eb763ebd718a8ccc340/j2kp4files_v1_5.zip' - sha1 'a90cad94abbe764918175db72b49df6d2f63704b' -end - -class Tiffpic < Formula - url 'ftp://ftp.remotesensing.org/pub/libtiff/pics-3.8.0.tar.gz' - sha1 'f50e14335fd98f73c6a235d3ff4d83cf4767ab37' -end - -class Bmpsuite < Formula - url 'http://entropymine.com/jason/bmpsuite/bmpsuite.zip' - sha1 '2e43ec4d8e6f628f71a554c327433914000db7ba' - version '1.0.0' -end - -class Tgautils < Formula - url 'http://makseq.com/materials/lib/Code/FileFormats/BitMap/TARGA/TGAUTILS.ZIP' - sha1 '0902c51e7b00ae70a460250f60d6adc41c8095df' - version '1.0.0' -end - -class OpenexrImages < Formula - url 'http://download.savannah.nongnu.org/releases/openexr/openexr-images-1.5.0.tar.gz' - sha1 '22bb1a3d37841a88647045353f732ceac652fd3f' -end - -class OiioImages < Formula - url 'https://github.com/OpenImageIO/oiio-images/tarball/9bf43561f5' - sha1 '8f12a86098120fd10ceb294a0d3aa1c95a0d3f80' - version '1.0.0' -end - - -class Openimageio < Formula - homepage 'http://openimageio.org' - url 'https://github.com/OpenImageIO/oiio/archive/Release-1.1.8.tar.gz' - sha1 '14ce1bb9067e70717de3f8d72c56342fa378a1e6' - - head 'https://github.com/OpenImageIO/oiio.git' - - option 'with-tests', 'Dowload 95MB of test images and verify Oiio (~2 min)' - - depends_on 'cmake' => :build - depends_on 'pkg-config' => :build - depends_on 'opencolorio' - depends_on 'ilmbase' - depends_on 'openexr' - depends_on 'boost' - depends_on 'libtiff' - depends_on 'jpeg' - depends_on 'openjpeg' - depends_on 'cfitsio' - depends_on 'hdf5' => 'enable-cxx' - depends_on 'field3d' - depends_on 'webp' - depends_on 'glew' - depends_on 'qt' - - def install - # Oiio is designed to have its testsuite images extracted one directory - # above the source. That's not a safe place for HB. Do the opposite, - # and move the entire source down into a subdirectory if --with-tests. - if build.include? 'with-tests' then - (buildpath+'localpub').install Dir['*'] - chdir 'localpub' - end - - j2k = Formula.factory('openjpeg').linked_keg.realpath - ENV.append 'MY_CMAKE_FLAGS', "-Wno-dev" # stops a warning. - ENV.append 'MY_CMAKE_FLAGS', "-DOPENJPEG_INCLUDE_DIR=#{j2k}/include/openjpeg-1.5" - args = ["USE_TBB=1", "EMBEDPLUGINS=1"] - - - python_prefix = `python-config --prefix`.strip - # Python is actually a library. The libpythonX.Y.dylib points to this lib, too. - if File.exist? "#{python_prefix}/Python" - # Python was compiled with --framework: - ENV.append 'MY_CMAKE_FLAGS', "-DPYTHON_LIBRARY='#{python_prefix}/Python'" - ENV.append 'MY_CMAKE_FLAGS', "-DPYTHON_INCLUDE_DIR='#{python_prefix}/Headers'" - else - python_version = `python-config --libs`.match('-lpython(\d+\.\d+)').captures.at(0) - python_lib = "#{python_prefix}/lib/libpython#{python_version}" - ENV.append 'MY_CMAKE_FLAGS', "-DPYTHON_INCLUDE_DIR='#{python_prefix}/include/python#{python_version}'" - if File.exists? "#{python_lib}.a" - ENV.append 'MY_CMAKE_FLAGS', "-DPYTHON_LIBRARY='#{python_lib}.a'" - else - ENV.append 'MY_CMAKE_FLAGS', "-DPYTHON_LIBRARY='#{python_lib}.dylib'" - end - end - - # Download standardized test images if the user throws --with-tests. - # 90% of the images are in tarballs, so they are cached normally. - # The webp and fits images are loose. Curl them each install. - if build.include? 'with-tests' then - d = buildpath - mkdir d+'webp-images' do - curl "http://www.gstatic.com/webp/gallery/[1-5].webp", "-O" - end - mkdir d+'fits-images' - mkdir d+'fits-images/pg93' do - curl "http://www.cv.nrao.edu/fits/data/tests/pg93/tst000[1-3].fits", "-O" - curl "http://www.cv.nrao.edu/fits/data/tests/pg93/tst000[5-9].fits", "-O" - curl "http://www.cv.nrao.edu/fits/data/tests/pg93/tst0013.fits", "-O" - end - mkdir d+'fits-images/ftt4b' do - curl "http://www.cv.nrao.edu/fits/data/tests/ftt4b/file00[1-3].fits", "-O" - curl "http://www.cv.nrao.edu/fits/data/tests/ftt4b/file0{09,12}.fits", "-O" - end - J2kp4files.new.brew { (d+'j2kp4files_v1_5').install Dir['J2KP4files/*'] } - Tiffpic.new.brew { (d+'libtiffpic').install Dir['*'] } - Bmpsuite.new.brew { (d+'bmpsuite').install Dir['*'] } - Tgautils.new.brew { (d+'TGAUTILS').install Dir['*'] } - OpenexrImages.new.brew { (d+'openexr-images-1.5.0').install Dir['*'] } - OiioImages.new('oiioimages').brew { (d+'oiio-images').install Dir['*'] } - end - - # make is a shell wrapper for cmake crafted by the devs (who have Lion). - system "make", *args - system "make test" if build.include? 'with-tests' - # There is no working make install in 1.1.6, devel or HEAD. - Dir.chdir 'dist/macosx' do - (lib + which_python ).install 'lib/python/site-packages' - prefix.install %w[ bin include ] - lib.install Dir[ 'lib/lib*' ] - doc.install 'share/doc/openimageio/openimageio.pdf' - prefix.install Dir['share/doc/openimageio/*'] - end - end - - def caveats; <<-EOS.undent - If OpenImageIO is brewed using non-homebrew Python, then you need to amend - your PYTHONPATH like so: - export PYTHONPATH=#{HOMEBREW_PREFIX}/lib/#{which_python}/site-packages:$PYTHONPATH - EOS - end - - def which_python - "python" + `python -c 'import sys;print(sys.version[:3])'`.strip - end -end diff --git a/Library/Formula/parmetis.rb b/Library/Formula/parmetis.rb deleted file mode 100644 index 624b3346e..000000000 --- a/Library/Formula/parmetis.rb +++ /dev/null @@ -1,15 +0,0 @@ -require 'formula' - -class Parmetis < Formula - homepage 'http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview' - url 'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/parmetis-4.0.2.tar.gz' - sha1 '1699453f0bd2ffed34e5a755dec92048d797476d' - - depends_on 'cmake' => :build - depends_on MPIDependency.new(:cc) - - def install - system "make", "config", "prefix=#{prefix}" - system 'make install' - end -end diff --git a/Library/Formula/qhull.rb b/Library/Formula/qhull.rb deleted file mode 100644 index 184e0eea1..000000000 --- a/Library/Formula/qhull.rb +++ /dev/null @@ -1,54 +0,0 @@ -require 'formula' - -class Qhull < Formula - homepage 'http://www.qhull.org/' - url 'http://www.qhull.org/download/qhull-2012.1-src.tgz' - sha1 '60f61580e1d6fbbd28e6df2ff625c98d15b5fbc6' - - depends_on 'cmake' => :build - - def patches - # Patch originally from MacPorts - cosmetic edits to CMakeLists.txt: - # - # * The VERSION property is no longer set on the command line tools. - # Setting this property causes CMake to install `binname-version` along - # with a symlink `binname` that points to `binname-version`. This is - # pointless for something that is managed by a package manager. - # https://trac.macports.org/export/83287/trunk/dports/math/qhull/files/patch-CMakeLists.txt.diff'} - DATA - end - - def install - system "cmake", ".", *std_cmake_args - system "make install" - end -end - -__END__ ---- a/CMakeLists.txt 2012-02-21 19:38:47.000000000 -0800 -+++ b/CMakeLists.txt 2012-06-18 09:33:28.000000000 -0700 -@@ -312,13 +312,10 @@ - # --------------------------------------- - - add_library(${qhull_STATIC} STATIC ${libqhull_SOURCES}) --set_target_properties(${qhull_STATIC} PROPERTIES -- VERSION ${qhull_VERSION}) - - add_library(${qhull_STATICP} STATIC ${libqhull_SOURCES}) - set_target_properties(${qhull_STATICP} PROPERTIES -- COMPILE_DEFINITIONS "qh_QHpointer" -- VERSION ${qhull_VERSION}) -+ COMPILE_DEFINITIONS "qh_QHpointer") - - if(UNIX) - target_link_libraries(${qhull_STATIC} m) -@@ -331,8 +328,7 @@ - - add_library(${qhull_CPP} STATIC ${libqhullcpp_SOURCES}) - set_target_properties(${qhull_CPP} PROPERTIES -- COMPILE_DEFINITIONS "qh_QHpointer" -- VERSION ${qhull_VERSION}) -+ COMPILE_DEFINITIONS "qh_QHpointer") - - # --------------------------------------- - # Define qhull executables linked to qhullstatic library diff --git a/Library/Formula/radx.rb b/Library/Formula/radx.rb deleted file mode 100644 index 6160dfaaf..000000000 --- a/Library/Formula/radx.rb +++ /dev/null @@ -1,27 +0,0 @@ -require 'formula' - -class Radx < Formula - homepage 'http://www.ral.ucar.edu/projects/titan/docs/radial_formats/radx.html' - url 'ftp://ftp.rap.ucar.edu/pub/titan/radx/Radx-20121120.src.tgz' - version '20121120' - sha1 '2c0ffa04c0f6b942fb2de1ec35256f857b5d2d63' - - depends_on 'hdf5' - depends_on 'udunits' - depends_on 'netcdf' => 'enable-cxx-compat' - depends_on 'fftw' - - fails_with :clang do - build 421 - cause "DsMdvx/msg_add.cc:516:11: error: '_printVsectWayPtsBuf' is a protected member of 'Mdvx'" - end - - def install - system "./configure", "--disable-dependency-tracking", "--prefix=#{prefix}" - system "make install" - end - - def test - system "#{bin}/RadxPrint", "-h" - end -end diff --git a/Library/Formula/scotch.rb b/Library/Formula/scotch.rb deleted file mode 100644 index 146880998..000000000 --- a/Library/Formula/scotch.rb +++ /dev/null @@ -1,27 +0,0 @@ -require 'formula' - -class Scotch < Formula - homepage 'https://gforge.inria.fr/projects/scotch' - url 'https://gforge.inria.fr/frs/download.php/31831/scotch_6.0.0.tar.gz' - sha1 'eb32d846bb14449245b08c81e740231f7883fea6' - - depends_on MPIDependency.new(:cc) - - def install - cd 'src' do - ln_s 'Make.inc/Makefile.inc.i686_mac_darwin8', 'Makefile.inc' - - inreplace 'Makefile.inc' do |s| - s.change_make_var! 'CCS', ENV['CC'] - s.change_make_var! 'CCP', ENV['MPICC'] - s.change_make_var! 'CCD', ENV['MPICC'] - # OS X doesn't implement pthread_barriers required by Scotch - s.slice! '-DCOMMON_PTHREAD' - s.slice! '-DSCOTCH_PTHREAD' - end - system 'make', 'scotch','VERBOSE=ON' - system 'make', 'ptscotch','VERBOSE=ON' - system 'make', 'install', "prefix=#{prefix}" - end - end -end diff --git a/Library/Formula/suite-sparse.rb b/Library/Formula/suite-sparse.rb deleted file mode 100644 index 3c133f6f7..000000000 --- a/Library/Formula/suite-sparse.rb +++ /dev/null @@ -1,51 +0,0 @@ -require 'formula' - -class SuiteSparse < Formula - homepage 'http://www.cise.ufl.edu/research/sparse/SuiteSparse' - url 'http://www.cise.ufl.edu/research/sparse/SuiteSparse/SuiteSparse-4.1.0.tar.gz' - sha1 '4f0bd70a87c89ed734558ece724a1bf99616f27b' - - option "without-tbb", "Do not link with tbb (Threading Building Block)" - option "with-metis", "Compile in metis libraries" - option "with-openblas", "Use openblas instead of Apple's Accelerate.framework" - - depends_on "tbb" unless build.include? "without-tbb" - # Metis is optional for now because of - # cholmod_metis.c:164:21: error: use of undeclared identifier 'idxtype' - depends_on "metis" if build.include? "with-metis" - depends_on "homebrew/science/openblas" if build.include? "with-openblas" - - def install - # SuiteSparse doesn't like to build in parallel - ENV.j1 - - inreplace 'SuiteSparse_config/SuiteSparse_config.mk' do |s| - if build.include? 'with-openblas' - s.change_make_var! "BLAS", "-lopenblas" - s.change_make_var! "LAPACK", "$(BLAS)" - else - s.change_make_var! "BLAS", "-Wl,-framework -Wl,Accelerate" - s.change_make_var! "LAPACK", "$(BLAS)" - end - - unless build.include? "without-tbb" - s.change_make_var! "SPQR_CONFIG", "-DHAVE_TBB" - s.change_make_var! "TBB", "-ltbb" - end - - if build.include? 'with-metis' - s.remove_make_var! "METIS_PATH" - s.change_make_var! "METIS", Formula.factory("metis").lib + "libmetis.a" - end - - s.change_make_var! "INSTALL_LIB", lib - s.change_make_var! "INSTALL_INCLUDE", include - end - - system "make library" - - lib.mkpath - include.mkpath - system "make install" - end -end diff --git a/Library/Formula/symphony.rb b/Library/Formula/symphony.rb deleted file mode 100644 index 35f797f5e..000000000 --- a/Library/Formula/symphony.rb +++ /dev/null @@ -1,38 +0,0 @@ -require 'formula' - -class Symphony < Formula - homepage 'http://www.coin-or.org/projects/SYMPHONY.xml' - url 'http://www.coin-or.org/download/source/SYMPHONY/SYMPHONY-5.3.3.tgz' - sha1 'afc38ee5655b52fc3fa0a5854b5cc5a7f31618cc' - - option "enable-openmp", "Enable openmp support" - option "with-gmpl", "GNU Modeling Language support via GLPK" - - def install - args = ["--disable-debug", "--disable-dependency-tracking", - "--enable-shared=no", # can't get shared libs to work - "--enable-static-executable", - "--prefix=#{prefix}"] - - if build.include? "with-gmpl" - # Symphony uses a patched version of GLPK for reading MPL files. - # Use a private version rather than require the Homebrew version of GLPK. - cd 'ThirdParty/Glpk' do - system "./get.Glpk" - end - - ENV.append "CPPFLAGS", "-I#{buildpath}/ThirdParty/Glpk/glpk/src" - ENV.append "CDEFS", "-DUSE_GLPMPL" - args << "--with-gmpl" - end - - if build.include? "enable-openmp" - inreplace 'SYMPHONY/config', /^SYM_COMPILE_IN_LP = TRUE/, "SYM_COMPILE_IN_LP = FALSE" - args << "--enable-openmp" - end - - system "./configure", *args - system "make" - system "make install" - end -end diff --git a/Library/Formula/triangle.rb b/Library/Formula/triangle.rb deleted file mode 100644 index 3c9754d9c..000000000 --- a/Library/Formula/triangle.rb +++ /dev/null @@ -1,34 +0,0 @@ -require 'formula' - -class Triangle < Formula - homepage 'http://www.cs.cmu.edu/~quake/triangle.html' - url 'http://www.netlib.org/voronoi/triangle.zip' - sha1 '63d11e0b5bf097eb946a4da4ee18ddf279e16fc4' - version '1.6' - - depends_on :x11 - - def install - inreplace 'makefile' do |s| - s.gsub! '-DLINUX', '' - s.remove_make_var! 'CC' - end - - system 'make' - system 'make', 'trilibrary' - system 'ar', 'r', 'libtriangle.a', 'triangle.o' - - bin.install %w(triangle showme) - lib.install 'libtriangle.a' - include.install 'triangle.h' - doc.install %w(README A.poly tricall.c) - end - - def caveats; <<-EOS.undent - Triangle is distributed under a license that places restrictions on how - the code or library may be used in commercial products. See the README - file for more info: - #{prefix}/README - EOS - end -end diff --git a/Library/Formula/unafold.rb b/Library/Formula/unafold.rb deleted file mode 100644 index 688a8925e..000000000 --- a/Library/Formula/unafold.rb +++ /dev/null @@ -1,17 +0,0 @@ -require 'formula' - -class Unafold < Formula - homepage 'http://mfold.rna.albany.edu/' - url 'http://mfold.rna.albany.edu/cgi-bin/UNAFold-download.cgi?unafold-3.8.tar.gz' - sha1 'b4f0296af9809ecb9f067f5adf17249315a50b7d' - - depends_on 'gd' - depends_on 'gnuplot' - - def install - system "./configure", "--disable-debug", "--disable-dependency-tracking", - "--prefix=#{prefix}" - system "make" - system "make install" - end -end diff --git a/Library/Formula/vcftools.rb b/Library/Formula/vcftools.rb deleted file mode 100644 index ce73b408d..000000000 --- a/Library/Formula/vcftools.rb +++ /dev/null @@ -1,22 +0,0 @@ -require 'formula' - -class Vcftools < Formula - homepage 'http://vcftools.sourceforge.net/index.html' - url 'http://downloads.sourceforge.net/project/vcftools/vcftools_0.1.10.tar.gz' - sha1 'a41cf3b13b574fde60e4d713f083b53e223ace55' - - def install - system "make", "install", "PREFIX=#{prefix}", "CPP=#{ENV.cxx}" - end - - def caveats; <<-EOS.undent - To use the Perl modules, make sure Vcf.pm, VcfStats.pm, and FaSlice.pm - are included in your PERL5LIB environment variable: - export PERL5LIB=#{HOMEBREW_PREFIX}/lib/perl5/site_perl:${PERL5LIB} - EOS - end - - def test - system "#{bin}/vcftools" - end -end diff --git a/Library/Formula/vips.rb b/Library/Formula/vips.rb deleted file mode 100644 index ccbffb1e8..000000000 --- a/Library/Formula/vips.rb +++ /dev/null @@ -1,32 +0,0 @@ -require 'formula' - -class Vips < Formula - homepage 'http://www.vips.ecs.soton.ac.uk/' - url 'http://www.vips.ecs.soton.ac.uk/supported/7.32/vips-7.32.1.tar.gz' - sha1 'f07cb324c9695129d2de0c140943865dcb99268f' - - depends_on 'pkg-config' => :build - depends_on :libpng - depends_on :fontconfig - depends_on 'gettext' - depends_on 'glib' - # Removed the optional flag to jpeg library as a temporary workaround since it fails to build - # Already reported on project here https://github.com/jcupitt/libvips/issues/57 - depends_on 'jpeg' - depends_on 'openslide' => :optional - depends_on 'libtiff' => :optional - depends_on 'imagemagick' => :optional - depends_on 'fftw' => :optional - depends_on 'little-cms' => :optional - depends_on 'pango' => :optional - depends_on 'libexif' => :optional - depends_on 'liboil' => :optional - depends_on 'openexr' => :optional - depends_on 'cfitsio' => :optional - - def install - system "./configure", "--disable-dependency-tracking", - "--prefix=#{prefix}" - system "make install" - end -end diff --git a/Library/Formula/vtk.rb b/Library/Formula/vtk.rb deleted file mode 100644 index 073e90f15..000000000 --- a/Library/Formula/vtk.rb +++ /dev/null @@ -1,144 +0,0 @@ -require 'formula' - -class Vtk < Formula - homepage 'http://www.vtk.org' - url 'http://www.vtk.org/files/release/5.10/vtk-5.10.1.tar.gz' - sha1 'deb834f46b3f7fc3e122ddff45e2354d69d2adc3' - - depends_on 'cmake' => :build - depends_on :x11 if build.include? 'x11' - depends_on 'qt' if build.include? 'qt' - - if build.include? 'pyqt' and build.include? 'python' - depends_on 'sip' - depends_on 'pyqt' - end - - option 'examples', 'Compile and install various examples' - option 'python', 'Enable python wrapping of VTK classes' - option 'pyqt', 'Make python wrapped classes available to SIP/PyQt' - option 'qt', 'Enable Qt4 extension via the Homebrew qt formula' - option 'qt-extern', 'Enable Qt4 extension via non-Homebrew external Qt4' - option 'tcl', 'Enable Tcl wrapping of VTK classes' - option 'x11', 'Enable X11 extension rather than OSX native Aqua' - - def patches - # Fix bug in Wrapping/Python/setup_install_paths.py: http://vtk.org/Bug/view.php?id=13699 - DATA - end - - def install - args = std_cmake_args + %W[ - -DVTK_REQUIRED_OBJCXX_FLAGS='' - -DVTK_USE_CARBON=OFF - -DBUILD_TESTING=OFF - -DBUILD_SHARED_LIBS=ON - -DCMAKE_INSTALL_RPATH:STRING='#{lib}/vtk-5.10' - -DCMAKE_INSTALL_NAME_DIR:STRING='#{lib}/vtk-5.10' - ] - - args << '-DBUILD_EXAMPLES=' + ((build.include? 'examples') ? 'ON' : 'OFF') - - if build.include? 'python' - args << '-DVTK_WRAP_PYTHON=ON' - - # Cmake picks up the system's python dylib, even if we have a brewed one. - python_prefix = `python-config --prefix`.strip - args << "-DPYTHON_LIBRARY='#{python_prefix}/Python'" - - # Install to lib and let installer symlink to global python site-packages. - # The path in lib needs to exist first and be listed in PYTHONPATH. - pydir = lib/which_python/'site-packages' - pydir.mkpath - ENV['PYTHONPATH'] = pydir - args << "-DVTK_PYTHON_SETUP_ARGS:STRING='--prefix=#{prefix} --install-lib=#{pydir} --single-version-externally-managed --record=installed-files.txt'" - - # For Xcode-only systems, the headers of system's python are inside of Xcode - if !MacOS::CLT.installed? and python_prefix.start_with? '/System/Library' - args << "-DPYTHON_INCLUDE_DIR='#{MacOS.sdk_path}/System/Library/Frameworks/Python.framework/Versions/2.7/Headers'" - end - - if build.include? 'pyqt' - args << '-DVTK_WRAP_PYTHON_SIP=ON' - args << "-DSIP_PYQT_DIR='#{HOMEBREW_PREFIX}/share/sip'" - end - end - - if build.include? 'qt' or build.include? 'qt-extern' - args << '-DVTK_USE_GUISUPPORT=ON' - args << '-DVTK_USE_QT=ON' - args << '-DVTK_USE_QVTK=ON' - end - - args << '-DVTK_WRAP_TCL=ON' if build.include? 'tcl' - - # Cocoa for everything except x11 - if build.include? 'x11' - args << '-DVTK_USE_COCOA=OFF' - args << '-DVTK_USE_X=ON' - else - args << '-DVTK_USE_COCOA=ON' - end - - unless MacOS::CLT.installed? - # We are facing an Xcode-only installation, and we have to keep - # vtk from using its internal Tk headers (that differ from OSX's). - args << "-DTK_INCLUDE_PATH:PATH=#{MacOS.sdk_path}/System/Library/Frameworks/Tk.framework/Headers" - args << "-DTK_INTERNAL_PATH:PATH=#{MacOS.sdk_path}/System/Library/Frameworks/Tk.framework/Headers/tk-private" - end - - args << ".." - - mkdir 'build' do - system 'cmake', *args - system 'make' - system 'make install' - end - - (share+'vtk').install 'Examples' if build.include? 'examples' - end - - def caveats - s = '' - vtk = Tab.for_formula 'vtk' - if build.include? 'python' or vtk.include? 'python' - s += <<-EOS.undent - For non-homebrew Python, you need to amend your PYTHONPATH like so: - export PYTHONPATH=#{HOMEBREW_PREFIX}/lib/#{which_python}/site-packages:$PYTHONPATH - - Even without the --pyqt option, you can display native VTK render windows - from python. Alternatively, you can integrate the RenderWindowInteractor - in PyQt, PySide, Tk or Wx at runtime. Look at - import vtk.qt4; help(vtk.qt4) or import vtk.wx; help(vtk.wx) - - EOS - end - if build.include? 'examples' or vtk.include? 'examples' - s += <<-EOS.undent - - The scripting examples are stored in #{HOMEBREW_PREFIX}/share/vtk - - EOS - end - return s.empty? ? nil : s - end - - def which_python - "python" + `python -c 'import sys;print(sys.version[:3])'`.strip - end -end - -__END__ -diff --git a/Wrapping/Python/setup_install_paths.py b/Wrapping/Python/setup_install_paths.py -index 00f48c8..014b906 100755 ---- a/Wrapping/Python/setup_install_paths.py -+++ b/Wrapping/Python/setup_install_paths.py -@@ -35,7 +35,7 @@ def get_install_path(command, *args): - option, value = string.split(arg,"=") - options[option] = value - except ValueError: -- options[option] = 1 -+ options[arg] = 1 - - # check for the prefix and exec_prefix - try: |