1 files changed, 0 insertions, 70 deletions
diff --git a/Library/Formula/bamtools.rb b/Library/Formula/bamtools.rb
deleted file mode 100644
index 4acf8e59c..000000000
--- a/Library/Formula/bamtools.rb
+++ /dev/null
@@ -1,70 +0,0 @@
-require 'formula'
-
-class Bamtools < Formula
-  homepage 'https://github.com/pezmaster31/bamtools'
-  url 'https://github.com/downloads/pezmaster31/bamtools/bamtools-1.0.2.tar.gz'
-  sha1 '70d4a1f8d7da73dd381b609b618ed19b6184366e'
-
-  head 'https://github.com/pezmaster31/bamtools.git'
-
-  depends_on 'cmake' => :build
-
-  # Install libbamtools in /usr/local/lib.
-  # Link statically with libbamtools-util and libjsoncpp, since
-  # they're not installed by default. Sent upstream:
-  # https://github.com/pezmaster31/bamtools/pull/55
-  def patches
-    DATA
-  end
-
-  def install
-    mkdir 'default' do
-      system "cmake", "..", *std_cmake_args
-      system "make install"
-    end
-  end
-
-  def test
-    system "#{bin}/bamtools", "--version"
-  end
-end
-
-__END__
-diff -ur bamtools-1.0.2.orig/src/api/CMakeLists.txt bamtools-1.0.2/src/api/CMakeLists.txt
---- bamtools-1.0.2.orig/src/api/CMakeLists.txt	2011-09-09 18:59:44.000000000 -0700
-+++ bamtools-1.0.2/src/api/CMakeLists.txt	2012-06-15 10:46:18.000000000 -0700
-@@ -54,8 +54,8 @@
- target_link_libraries( BamTools-static z )
- 
- # set library install destinations
--install( TARGETS BamTools LIBRARY DESTINATION "lib/bamtools" RUNTIME DESTINATION "bin")
--install( TARGETS BamTools-static ARCHIVE DESTINATION "lib/bamtools")
-+install( TARGETS BamTools LIBRARY DESTINATION "lib" RUNTIME DESTINATION "bin")
-+install( TARGETS BamTools-static ARCHIVE DESTINATION "lib")
- 
- # export API headers
- include(../ExportHeader.cmake)
-diff -ur bamtools-1.0.2.orig/src/third_party/jsoncpp/CMakeLists.txt bamtools-1.0.2/src/third_party/jsoncpp/CMakeLists.txt
---- bamtools-1.0.2.orig/src/third_party/jsoncpp/CMakeLists.txt	2012-06-15 10:39:40.000000000 -0700
-+++ bamtools-1.0.2/src/third_party/jsoncpp/CMakeLists.txt	2012-06-15 10:41:49.000000000 -0700
-@@ -10,7 +10,7 @@
- add_definitions( -fPIC ) # (attempt to force PIC compiling on CentOS, not being set on shared libs by CMake)
- 
- # create jsoncpp library
--add_library ( jsoncpp SHARED 
-+add_library ( jsoncpp STATIC 
-               json_reader.cpp
-               json_value.cpp
-               json_writer.cpp
-diff -ur bamtools-1.0.2.orig/src/utils/CMakeLists.txt bamtools-1.0.2/src/utils/CMakeLists.txt
---- bamtools-1.0.2.orig/src/utils/CMakeLists.txt	2012-06-15 10:39:40.000000000 -0700
-+++ bamtools-1.0.2/src/utils/CMakeLists.txt	2012-06-15 10:41:34.000000000 -0700
-@@ -13,7 +13,7 @@
- add_definitions( -fPIC ) # (attempt to force PIC compiling on CentOS, not being set on shared libs by CMake)
- 
- # create BamTools utils library
--add_library ( BamTools-utils SHARED 
-+add_library ( BamTools-utils STATIC 
-               bamtools_fasta.cpp
-               bamtools_options.cpp
-               bamtools_pileup_engine.cpp