diff options
| -rw-r--r-- | Library/Formula/tophat.rb | 19 |
1 files changed, 19 insertions, 0 deletions
diff --git a/Library/Formula/tophat.rb b/Library/Formula/tophat.rb new file mode 100644 index 000000000..72101c6a5 --- /dev/null +++ b/Library/Formula/tophat.rb @@ -0,0 +1,19 @@ +require 'formula' + +class Tophat <Formula + url 'http://tophat.cbcb.umd.edu/downloads/tophat-1.2.0.tar.gz' + homepage 'http://tophat.cbcb.umd.edu/' + md5 '7ada78bdb9a84e13392418aa6cc9142c' + + depends_on 'samtools' + + def install + # It seems this project Makefile doesn't like -j4 + # Disable until consult with upstream + ENV.deparallelize + + system "./configure", "--disable-debug", "--disable-dependency-tracking", + "--prefix=#{prefix}" + system "make install" + end +end |