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authorJack Nagel2014-06-04 22:36:30 -0500
committerJack Nagel2014-06-04 22:36:59 -0500
commitdfb3297be0984a566cf3e31fee08ec835d5cd370 (patch)
tree5a0f485fcd88cf960791907cbc27c48f18edb7f7 /Library
parent5afa8cb00a17a4227645a60d07548dde8c453f66 (diff)
downloadhomebrew-dfb3297be0984a566cf3e31fee08ec835d5cd370.tar.bz2
Remove tmap
Closes #29744.
Diffstat (limited to 'Library')
-rw-r--r--Library/Formula/tmap.rb46
-rw-r--r--Library/Homebrew/tap_migrations.rb1
2 files changed, 1 insertions, 46 deletions
diff --git a/Library/Formula/tmap.rb b/Library/Formula/tmap.rb
deleted file mode 100644
index 3040cdf71..000000000
--- a/Library/Formula/tmap.rb
+++ /dev/null
@@ -1,46 +0,0 @@
-require 'formula'
-
-class Tmap < Formula
- homepage 'https://github.com/iontorrent/TMAP'
- url 'https://github.com/iontorrent/TMAP.git', :tag => 'tmap.3.2.0'
-
- head 'https://github.com/iontorrent/TMAP.git'
-
- env :std
-
- option '32-bit'
- option 'indels', 'Enable adjacent insertion and deletions in the alignment'
- option 'perf', 'Enable google performance tools for profiling and heap checking'
- option 'nocolor', 'Disable terminal coloring'
-
- depends_on "autoconf" => :build
- depends_on "automake" => :build
- depends_on "libtool" => :build
- depends_on "google-perftools" if build.include? "perf"
-
- fails_with :clang do
- build 425
- cause 'Missing symbols being discussed in iontorrent/TMAP#3'
- end
-
- def install
- system 'sh', 'autogen.sh'
- args = %W[
- --disable-dependency-tracking
- --prefix=#{prefix}
- ]
- args << '--enable-32bit-support' if build.include? '32-bit' or not MacOS.prefer_64_bit?
- args << '--enable-perftools' if build.include? 'perf'
- args << '--disable-coloring' if build.include? 'nocolor'
- args << '--enable-adjacent-indels' if build.include? 'indels'
-
- system "./configure", *args
- ENV.j1
- system 'make'
- system "make install"
- end
-
- test do
- system "#{bin}/tmap", "-v"
- end
-end
diff --git a/Library/Homebrew/tap_migrations.rb b/Library/Homebrew/tap_migrations.rb
index 4da24c137..040f7d296 100644
--- a/Library/Homebrew/tap_migrations.rb
+++ b/Library/Homebrew/tap_migrations.rb
@@ -47,6 +47,7 @@ TAP_MIGRATIONS = {
"storm" => "homebrew/boneyard",
"syslog-ng" => "homebrew/boneyard",
"tetgen" => "homebrew/science",
+ "tmap" => "homebrew/boneyard",
"urweb" => "homebrew/boneyard",
"wkhtmltopdf" => "homebrew/boneyard",
}