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| author | Austin G. Davis-Richardson | 2011-07-22 11:41:42 -0400 |
|---|---|---|
| committer | Adam Vandenberg | 2011-08-12 12:20:33 -0700 |
| commit | 32d87affb25a9b8429d0602b8405de8b4f459a3d (patch) | |
| tree | 296ace2d6dee11a7d8f8ff38c9452b40bd5775c2 /Library | |
| parent | 1d79d0c3cadfcc2d15f5d7015efccecd6c5a2daa (diff) | |
| download | homebrew-32d87affb25a9b8429d0602b8405de8b4f459a3d.tar.bz2 | |
Velvet 1.1.05
Signed-off-by: Adam Vandenberg <flangy@gmail.com>
Diffstat (limited to 'Library')
| -rw-r--r-- | Library/Formula/velvet.rb | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/Library/Formula/velvet.rb b/Library/Formula/velvet.rb new file mode 100644 index 000000000..1b52f57cf --- /dev/null +++ b/Library/Formula/velvet.rb @@ -0,0 +1,35 @@ +require 'formula' + +class Velvet < Formula + url 'https://github.com/dzerbino/velvet/tarball/b19ee2d5a180c745a6b44fd0d27c3d36dd80a7a9' + homepage 'http://www.ebi.ac.uk/~zerbino/velvet/' + md5 '8772b8c2c8071dc62541bc969bcd4490' + version '1.1.05' + + head 'https://github.com/dzerbino/velvet.git', :using => :git + + def patches + # Makefile recommends uncommenting a line for compiling on Mac OS X + DATA + end + + def install + system "make velveth velvetg OPENMP=1 MAXKMERLENGTH=1 LONGSEQUENCES=1" + bin.install ['velveth', 'velvetg'] + end +end + +__END__ +diff --git a/Makefile b/Makefile +index a8ca8c0..16fb62a 100644 +--- a/Makefile ++++ b/Makefile +@@ -8,7 +8,7 @@ CATEGORIES=2 + DEF = -D MAXKMERLENGTH=$(MAXKMERLENGTH) -D CATEGORIES=$(CATEGORIES) + + # Mac OS users: uncomment the following lines +-# CFLAGS = -Wall -m64 ++CFLAGS = -Wall -m64 + + # Sparc/Solaris users: uncomment the following line + # CFLAGS = -Wall -m64 |