samtools 0.1.12a

Signed-off-by: Adam Vandenberg <flangy@gmail.com>

1 files changed, 20 insertions, 0 deletions

diff --git a/Library/Formula/samtools.rb b/Library/Formula/samtools.rb
new file mode 100644
index 000000000..eb3e2e4bb
--- /dev/null
+++ b/Library/Formula/samtools.rb
@@ -0,0 +1,20 @@
+require 'formula'
+
+class Samtools <Formula
+  url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.12/samtools-0.1.12a.tar.bz2'
+  homepage 'http://samtools.sourceforge.net/'
+  md5 '500ae32fb431de3940e0e955744b9b36'
+
+  def install
+    # -s is needed on OS X here.
+    inreplace ["Makefile", "bcftools/Makefile"], "$(AR)", "$(AR) -s"
+
+    system "make"
+    system "make razip"
+
+    bin.install %w{samtools razip}
+    prefix.install %w{examples misc}
+    lib.install 'libbam.a'
+    (include+'bam').install Dir['*.h']
+  end
+end