New formula: newick-utils

newick-utils is a set of tools for working with Newick-formatted tree
data.

Closes #8717.

Signed-off-by: Jack Nagel <jacknagel@gmail.com>

1 files changed, 31 insertions, 0 deletions

diff --git a/Library/Formula/newick-utils.rb b/Library/Formula/newick-utils.rb
new file mode 100644
index 000000000..921193d86
--- /dev/null
+++ b/Library/Formula/newick-utils.rb
@@ -0,0 +1,31 @@
+require 'formula'
+
+class NewickUtils < Formula
+  url 'http://cegg.unige.ch/pub/newick-utils-1.5.0.tar.gz'
+  homepage 'http://cegg.unige.ch/newick_utils'
+  md5 '5f65b0fe30bf9389297616358f01fac7'
+
+  def patches
+    # don't bother testing nw_gen, it's known to fail on MacOSX
+    DATA
+  end
+
+  def install
+    system "./configure", "--disable-dependency-tracking",
+                          "--prefix=#{prefix}"
+    system "make"
+    system "make check"
+    system "make install"
+  end
+
+  def test
+    system "echo '(B:1,C:2)A;' | nw_display -"
+  end
+end
+
+__END__
+--- a/tests/test_nw_gen.sh
++++ b/tests/test_nw_gen.sh
+@@ -106,0 +107,2 @@
++pass=TRUE
++